PEcAn.DB - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

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pecandatabasebayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

12.08 score 236 stars 26 dependents 129 scripts

PEcAn.data.atmosphere - PEcAn Functions Used for Managing Climate Driver Data

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The PECAn.data.atmosphere package converts climate driver data into a standard format for models integrated into PEcAn. As a standalone package, it provides an interface to access diverse climate data sets.

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climate-datadata-standardizationbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

11.88 score 236 stars 14 dependents 75 scripts

PEcAn.utils - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PEcAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

pecanbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

11.22 score 236 stars 36 dependents 257 scripts

BayesianTools - General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics

General-purpose MCMC and SMC samplers, as well as plots and diagnostic functions for Bayesian statistics, with a particular focus on calibrating complex system models. Implemented samplers include various Metropolis MCMC variants (including adaptive and/or delayed rejection MH), the T-walk, two differential evolution MCMCs, two DREAM MCMCs, and a sequential Monte Carlo (SMC) particle filter.

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bayesecological-modelsmcmcoptimizationsmcsystems-biologycpp

11.03 score 129 stars 8 dependents 716 scripts 1.5k downloads

PEcAn.MA - PEcAn Functions Used for Meta-Analysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. The PEcAn.MA package contains the functions used in the Bayesian meta-analysis of trait data.

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parameter-estimationmodel-calibrationbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplantsjagscpp

10.40 score 236 stars 7 dependents 7 scripts

PEcAn.benchmark - PEcAn Functions Used for Benchmarking

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PEcAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. The PEcAn.benchmark package provides utilities for comparing models and data, including a suite of statistical metrics and plots.

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model-evaluationmodel-data-comparisonpecanbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

10.36 score 236 stars 3 dependents 431 scripts

PEcAn.settings - PEcAn Settings package

Contains functions to read PEcAn settings files.

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pecanworkflow-configurationbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

10.24 score 236 stars 13 dependents 75 scripts

PEcAn.assim.batch - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

data-assimilationparameter-estimationbayesian-inferenceecological-modelingmodel-calibrationbayesiancyberinfrastructuredata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplantsjagscpp

10.22 score 236 stars 2 dependents 23 scripts

PEcAn.priors - PEcAn Functions Used to Estimate Priors from Data

Functions to estimate priors from data.

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bayesian-inferencestatistical-validationbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplantsjagscpp

10.11 score 236 stars 6 dependents 12 scripts

PEcAn.remote - PEcAn Model Execution Utilities

This package contains utilities for communicating with and executing code on local and remote hosts. In particular, it has PEcAn-specific utilities for starting ecosystem model runs.

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pecandistributed-computingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

9.87 score 236 stars 32 dependents 13 scripts

PEcAn.logger - Logger Functions for 'PEcAn'

Convenience functions for logging outputs from 'PEcAn', the Predictive Ecosystem Analyzer (LeBauer et al. 2017) <doi:10.1890/12-0137.1>. Enables the user to set what level of messages are printed, as well as whether these messages are written to the console, a file, or both. It also allows control over whether severe errors should stop execution of the 'PEcAn' workflow; this allows strictness when debugging and lenience when running large batches of simulations that should not be terminated by errors in individual models. It is loosely based on the 'log4j' package.

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pecanloggererror-handlinglogging-levelsmessage-filteringbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

9.86 score 236 stars 41 dependents 8 scripts

PEcAnRTM - PEcAn Functions Used for Radiative Transfer Modeling

Functions for performing forward runs and inversions of radiative transfer models (RTMs). Inversions can be performed using maximum likelihood, or more complex hierarchical Bayesian methods. Underlying numerical analyses are optimized for speed using Fortran code.

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radiative-transfer-modelingbayesian-inversionpecanbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplantsjagscpp

9.85 score 236 stars 120 scripts

PEcAn.visualization - PEcAn visualization functions

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. This module is used to create more complex visualizations from the data generated by PEcAn code, specifically the models.

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pecandata-visualizationstatistical-graphicsggplot2bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

9.72 score 236 stars 88 scripts

PEcAn.data.land - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

soil-datavegetation-dataland-coverbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

9.63 score 236 stars 10 dependents 24 scripts

PEcAn.uncertainty - PEcAn Functions Used for Propagating and Partitioning Uncertainties in Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

ecological-forecastingsensitivity-analysispecanuncertainty-propagationbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplantsjagscpp

9.40 score 236 stars 5 dependents 28 scripts

PEcAn.allometry - PEcAn Allometry Functions

Synthesize allometric equations or fit allometries to data.

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allometrybiomassplant-traitsbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

9.33 score 236 stars 36 scripts

PEcAn.qaqc - QAQC

PEcAn integration and model skill testing

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pecanquality-controldata-cleaningbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplants

9.25 score 236 stars 5 scripts

PEcAn.all - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PEcAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

pecanmodel-validationmodel-evaluationmodel-comparisonreproducibilitybayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplantsjagscpp

9.24 score 236 stars 295 scripts

SticsRFiles - Read and Modify 'STICS' Input/Output Files

Manipulating input and output files of the 'STICS' crop model. Files are either 'JavaSTICS' XML files or text files used by the model 'fortran' executable. Most basic functionalities are reading or writing parameter names and values in both XML or text input files, and getting data from output files. Advanced functionalities include XML files generation from XML templates and/or spreadsheets, or text files generation from XML files by using 'xslt' transformation.

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9.21 score 5 stars 2 dependents 90 scripts 311 downloads

PEcAn.BIOCRO - PEcAn Package for Integration of the BioCro Model

This module provides functions to link BioCro to PEcAn.

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bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

9.15 score 236 stars 24 scripts

PEcAn.MAAT - PEcAn Package for Integration of the MAAT Model

This module provides functions to wrap the MAAT model into the PEcAn workflows.

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maatecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

9.12 score 236 stars 11 scripts

PEcAn.photosynthesis - PEcAn functions used for leaf-level photosynthesis calculations

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. The PEcAn.photosynthesis package contains functions used in the Hierarchical Bayesian calibration of the Farquhar et al 1980 model.

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photosynthesispecanbayesian calibrationjagsbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplantscpp

9.10 score 236 stars 21 scripts

PEcAn.workflow - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PEcAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. This package provides workhorse functions that can be used to run the major steps of a PEcAn analysis.

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pecandata-assimilationecosystem-modelingreproducibilitybayesiancyberinfrastructuredata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationplantsjagscpp

9.03 score 236 stars 4 dependents 15 scripts

PEcAn.emulator - Gausian Process Emulator

Implementation of a Gaussian Process model (both likelihood and bayesian approaches) for kriging and model emulation. Includes functions for sampling design and prediction.

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emulatorgaussian-processbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

9.03 score 236 stars 6 dependents 1 scripts

PEcAn.ED2 - PEcAn Package for Integration of ED2 Model

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. This package provides functions to link the Ecosystem Demography Model, version 2, to PEcAn.

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ed2ecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

8.97 score 236 stars 158 scripts

PEcAn.data.remote - PEcAn Functions Used for Extracting Remote Sensing Data

PEcAn module for processing remote data. Python module requirements: requests, json, re, ast, panads, sys. If any of these modules are missing, install using pip install <module name>.

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remote-sensingmodislandsatearth-observationbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

8.95 score 236 stars 5 dependents 6 scripts

PEcAn.SIPNET - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

sipnetecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

8.55 score 236 stars 60 scripts

PEcAn.LINKAGES - PEcAn Package for Integration of the LINKAGES Model

This module provides functions to link the (LINKAGES) to PEcAn.

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linkagesecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

8.55 score 236 stars 59 scripts

PEcAnAssimSequential - PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

state-data-assimilationensemble-kalman-filterparticle-filterecological-forecastingforecast-verificationbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplantsjagscpp

8.45 score 236 stars 47 scripts

PEcAn.DALEC - PEcAn Package for Integration of the DALEC Model

This module provides functions to link DALEC to PEcAn.

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dalececosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 7 scripts

PEcAn.LDNDC - PEcAn package for integration of the LDNDC model

This module provides functions to link the (LDNDC) to PEcAn.

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ldndcecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars

PEcAn.dvmdostem - PEcAn Package for Integration of the Dvmdostem Model

This module provides functions to link the dvmdostem model to PEcAn.

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dvmdostemecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 3 scripts

PEcAn.GDAY - PEcAn Package for Integration of the GDAY Model

This module provides functions to link the GDAY model to PEcAn.

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gdayecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 1 scripts

PEcAn.CABLE - PEcAn package for integration of the CABLE model

This module provides functions to link the (CABLE) to PEcAn.

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cableecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars

PEcAn.FATES - PEcAn Package for Integration of FATES Model

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. This package provides functions to link the FATES model to PEcAn.

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fatesecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 6 scripts

PEcAn.RothC - PEcAn Package for Integration of the RothC Model

This module provides functions to link the Rothamstead soil carbon model "RothC" to PEcAn. Uses RothC >= 2.0, available on GitHub <https://github.com/Rothamsted-Models/RothC_Code> as well as directly from the RothC team <https://www.rothamsted.ac.uk/rothamsted-carbon-model-rothc>.

Last updated

bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars

PEcAn.PEPRMT - PEcAn Package for Integration of the PEPRMT Model

This module provides functions to link PEPRMT to PEcAn.

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bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 1 scripts

PEcAn.PRELES - PEcAn Package for Integration of the PRELES Model

This module provides functions to run the PREdict Light use efficiency Evapotranspiration and Soil moisture (PRELES) model on the PEcAn project. The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool designed to simplify the management of model parameterization,execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Last updated

prelesecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 3 scripts

PEcAn.CLM45 - PEcAn Package for Integration of CLM4.5 Model

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation. This package provides functions to link the Community Land Model, version 4.5, to PEcAn.

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clm45ecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 1 scripts

PEcAn.LPJGUESS - PEcAn Package for Integration of the LPJ-GUESS Model

This module provides functions to link LPJ-GUESS to PEcAn.

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lpj-guessecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplantscpp

7.77 score 236 stars 1 scripts

PEcAn.data.mining - PEcAn Functions Used for Exploring Model Residuals and Structures

(Temporary description) PEcAn functions used for exploring model residuals and structures.

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bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 1 scripts

PEcAn.JULES - PEcAn Package for Integration of the JULES Model

This module provides functions to link the (JULES) to PEcAn.

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julesecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars

PEcAn.STICS - PEcAn Package for Integration of the STICS Model

This module provides functions to link the STICS to PEcAn.

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sticsecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars

PEcAn.BASGRA - PEcAn Package for Integration of the BASGRA Model

This module provides functions to link the BASGRA model to PEcAn.

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bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplantsfortranglibc

7.77 score 236 stars 1 scripts

PEcAn.SIBCASA - PEcAn Package for Integration of the SiBCASA Model

This module provides functions to link (SiBCASA) to PEcAn. It is a work in progress and is not yet fully functional.

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sibcasaecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars

PEcAn.MAESPA - PEcAn Functions Used for Ecological Forecasts and Reanalysis using MAESPA

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PECAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.This package allows for MAESPA to be run through the PEcAN workflow.

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maespaecosystem-modelingbayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

7.77 score 236 stars 2 scripts

amerifluxr - Interface to 'AmeriFlux' Data Services

Programmatic interface to the 'AmeriFlux' database (<https://ameriflux.lbl.gov/>). Provide query, download, and data summary tools.

Last updated

amerifluxapicarbon-fluxdatatime-series

6.02 score 26 stars 15 dependents 45 scripts 34 downloads

SticsOnR - Manage STICS Simulations Running the Executable or JavaStics,

Running simulations with the 'STICS' crop model. Different ways of performing simulations are available and based on three use-cases: 1/ Calling 'JavaStics' command line to run simulations on given situations. 'JavaStics' handles text files generation from 'XML' files; 2/ Calling the model 'fortran' executable directly. Text files must be produced beforehand; and 3/ Calling the model 'fortran' executable through a wrapper. It can handle distributed runs over the machine CPUs and returns simulated output data. The wrapper also provides a concise manner for running simulations using custom parameter values and allows to chain simulations for successive situations.

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5.90 score 8 stars 1 dependents 22 scripts

BioCro - BioCro Crop and Agroecosystem Simulator

Simulate C4 crops and coppice trees.

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5.68 score 48 stars 125 scripts 378 downloads

PEPRMT - Peatland Ecosystem Photosynthesis, Respiration and Methane Transport model

PEPRMT-Tidal is a one-dimensional process-based model that predicts gross primary productivity, ecosystem respiration and methane exchange in tidal wetlands at the daily time step. This package contains functions for PEPRMT-Tidal, an updated version of the PEPRMT model. This model is described in detail in Oikawa et al. (2024).

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4.32 score 1 dependents

Maeswrap - Wrapper functions for MAESTRA/MAESPA

A bundle of functions for modifying MAESTRA/MAESPA input files, reading output files, and visualizing the stand in 3D. Handy for running sensitivity analyses, scenario analyses, etc.

Last updated

3.92 score 3 stars 28 scripts 230 downloads

nneo - 'NEON' 'API' Client

'NEON' 'API' (<http://data.neonscience.org/data-api>) client. Includes methods for interacting with all 'API' routes.

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ecology

3.04 score 11 stars 7 scripts 8 downloads

linkages - A Linked Forest Productivity - Soil Process Model

LINKAGES is a forest gap model originally written in FORTRAN by Pastor and Post in 1985.

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2.23 score 4 stars 14 scripts