Package: PEcAn.all 1.8.0.9000

David LeBauer

PEcAn.all: PEcAn Functions Used for Ecological Forecasts and Reanalysis

The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific workflow management tool that is designed to simplify the management of model parameterization, execution, and analysis. The goal of PEcAn is to streamline the interaction between data and models, and to improve the efficacy of scientific investigation.

Authors:Mike Dietze [aut], David LeBauer [aut, cre], Xiaohui Feng [aut], Dan Wang [aut], Carl Davidson [aut], Rob Kooper [aut], Shawn Serbin [aut], Ankur Desai [aut], James Simkins [aut], Chris Black [aut], Istem Fer [aut], Hamze Dookohaki [aut], Alexey Shiklomanov [aut], Elizabeth Cowdery [aut], Ann Raiho [aut], Tess McCabe [aut], Tony Gardella [aut], University of Illinois, NCSA [cph]

PEcAn.all_1.8.0.9000.tar.gz
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PEcAn.all_1.8.0.9000.tgz(r-4.4-any)PEcAn.all_1.8.0.9000.tgz(r-4.3-any)
PEcAn.all_1.8.0.9000.tar.gz(r-4.5-noble)PEcAn.all_1.8.0.9000.tar.gz(r-4.4-noble)
PEcAn.all_1.8.0.9000.tgz(r-4.4-emscripten)
PEcAn.all.pdf |PEcAn.all.html
PEcAn.all/json (API)
NEWS

# Install 'PEcAn.all' in R:
install.packages('PEcAn.all', repos = c('https://pecanproject.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/pecanproject/pecan/issues

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplantsjagscpp

8.96 score 211 stars 266 scripts 1 exports 284 dependencies

Last updated 2 days agofrom:f184978397. Checks:1 OK, 1 NOTE, 5 FAILURE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 04 2025
R-4.5-winOUTDATEDJan 18 2025
R-4.5-linuxNOTEFeb 04 2025
R-4.4-winOUTDATEDJan 18 2025
R-4.4-macOUTDATEDJan 18 2025
R-4.3-winOUTDATEDJan 18 2025
R-4.3-macOUTDATEDJan 18 2025

Exports:pecan_version

Dependencies:abindadmiscalabamaamerifluxrapearrowaskpassassertthatbase64encBayesianToolsbigleafbitbit64bitopsblobbootbridgesamplingBrobdingnagbslibcacachemcallrCDMcellrangerclassclassIntclicliprclueclustercodacodetoolscolorspacecommonmarkcpp11crayoncrosstalkcrulcurldata.tableDBIdbplyrdeldirdendextendDEoptimRDHARMadiagramdigestdoParalleldownloaderdplRdplyrduckdbduckdbfse1071eggellipseemulatorevaluateexpmfansifarverfastmapfauxpasfBasicsfontawesomeforeachfsfurrrfuturefuture.applygapgap.datasetsgclusgenericsgeonamesgetoptggplot2ggrepelglobalsgluegmmgridExtragssgtableHDIntervalheatmaplyherehighrhmshtmltoolshtmlwidgetshttpcodehttpuvhttrIDPmiscigraphisobanditeratorsjquerylibjsonliteKernSmoothkknnknitrlabelinglaterlatticelavalazyevallifecyclelistenvlme4lmtestlqmmlubridatemagrittrMASSMatrixMatrixModelsmatrixStatsmcmcMCMCpackmemoisemgcvmimeminqamlegpmodeestMODISToolsmsmmunsellmvtnormncdf4neonstoreneonUtilitiesnleqslvnlmenloptrnneonumDerivopenssloptparseparallellypbapplypbvPEcAn.assim.batchPEcAn.benchmarkPEcAn.data.atmospherePEcAn.data.landPEcAn.data.remotePEcAn.DBPEcAn.emulatorPEcAn.loggerPEcAn.MAPEcAn.priorsPEcAn.remotePEcAn.settingsPEcAn.uncertaintyPEcAn.utilsPEcAn.visualizationPEcAn.workflowpermutepillarpkgconfigplotlyplyrpngpolyclippolycorprettyunitsprocessxprodlimprogressprogressrpromisesproxypspurrrqapqgamqrngquantregR.methodsS3R.ooR.utilsR6randtoolboxrappdirsrasterrbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRcppTOMLRCurlRdpackreadrreadxlREddyProcreformulasregistryrematchreshape2reticulaterjagsrjsonrlangrmarkdownrmutilrngWELLrobustbaserpartrprojrootrunjagss2sandwichsassscalesseriationsfshapeshinysignalSimilarityMeasuressirtsolartimesourcetoolsspspacefillrSparseGridSparseMspatialspatstat.dataspatstat.geomspatstat.univarspatstat.utilsSQUAREMstablestablediststatipstorrstringistringrsuntoolssurvivalswfscMiscsysTAMterrathortibbletidyrtidyselecttimechangetimeDatetimeSeriestinytextmvtnormtraitstriebeardTruncatedNormaltruncnormTSPtzdbunitsurltoolsutf8vctrsveganviridisviridisLitevroomwebshotwhiskerwithrwkxfunXMLxtablextsyamlzipzoo