Package: PEcAn.LINKAGES 1.7.3.9000

Ann Raiho

PEcAn.LINKAGES: PEcAn Package for Integration of the LINKAGES Model

This module provides functions to link the (LINKAGES) to PEcAn.

Authors:Mike Dietze [aut], Ann Raiho [aut, cre], University of Illinois, NCSA [cph]

PEcAn.LINKAGES_1.7.3.9000.tar.gz

PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.4-any)PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.3-any)
PEcAn.LINKAGES_1.7.3.9000.tar.gz(r-4.5-noble)PEcAn.LINKAGES_1.7.3.9000.tar.gz(r-4.4-noble)
PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.4-emscripten)PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.3-emscripten)
PEcAn.LINKAGES.pdf |PEcAn.LINKAGES.html✨
PEcAn.LINKAGES/json (API)
NEWS

# Install 'PEcAn.LINKAGES' in R:
install.packages('PEcAn.LINKAGES', repos = c('https://pecanproject.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/pecanproject/pecan/issues

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3

On CRAN:

bayesiancyberinfrastructuredata-assimilationdata-scienceecosystem-modelecosystem-scienceforecastingmeta-analysisnational-science-foundationpecanplants

8.30 score 203 stars 59 scripts 6 exports 155 dependencies

Last updated 2 days agofrom:cab30e89b4. Checks:OK: 1 NOTE: 3. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 20 2024
R-4.5-linuxNOTENov 20 2024
R-4.4-macNOTENov 20 2024
R-4.3-macNOTENov 20 2024

Exports:met2model.LINKAGESmodel2netcdf.LINKAGESread_restart.LINKAGESsplit_inputs.LINKAGESwrite_restart.LINKAGESwrite.config.LINKAGES

Dependencies:abindadmiscaskpassbitbit64blobbootcachemCDMclassclassIntcliclueclustercodacodetoolscolorspacecpp11crayoncurldata.tableDBIdbplyrdeldirdigestdownloaderdplRdplyrduckdbduckdbfse1071fansifarverfastmapfBasicsforeachfsfurrrfuturegenericsgetoptggplot2ggrepelglobalsgluegridExtragssgtableHDIntervalhmshttrigraphisobanditeratorsjsonliteKernSmoothkknnlabelinglatticelifecyclelistenvlubridatemagrittrMASSMatrixmatrixStatsmemoisemgcvmimemodeestmunsellmvtnormncdf4neonstoreneonUtilitiesnlmeopenssloptparseparallellypbapplypbvPEcAn.benchmarkPEcAn.data.landPEcAn.DBPEcAn.loggerPEcAn.remotePEcAn.settingsPEcAn.utilsPEcAn.visualizationpillarpkgconfigplyrpngpolyclippolycorprettyunitsprogressproxypurrrR.methodsS3R.ooR.utilsR6RColorBrewerRcppRcppArmadilloreshape2rjagsrlangrmutilrpartrunjagss2scalessfsignalSimilarityMeasuressirtspspatialspatstat.dataspatstat.geomspatstat.univarspatstat.utilsstablestablediststatipstorrstringistringrswfscMiscsysTAMterrathortibbletidyrtidyselecttimechangetimeDatetimeSeriestraitstriebeardtzdbunitsurltoolsutf8vctrsviridisLitevroomwithrwkXMLzipzoo

Readme and manuals

Help Manual

Help pageTopics
Write LINKAGES met filesmet2model.LINKAGES
Convert LINKAGES's output into netCDF formatmodel2netcdf.LINKAGES
Read Restart for LINKAGESread_restart.LINKAGES
split_inputs.LINKAGESsplit_inputs.LINKAGES
write_restart.LINKAGESwrite_restart.LINKAGES
Writes a LINKAGES config file.write.config.LINKAGES