Package: PEcAn.LINKAGES 1.7.3.9000

Ann Raiho

PEcAn.LINKAGES: PEcAn Package for Integration of the LINKAGES Model

This module provides functions to link the (LINKAGES) to PEcAn.

Authors:Mike Dietze [aut], Ann Raiho [aut, cre], University of Illinois, NCSA [cph]

PEcAn.LINKAGES_1.7.3.9000.tar.gz

PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.4-any)PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.3-any)
PEcAn.LINKAGES_1.7.3.9000.tar.gz(r-4.5-noble)PEcAn.LINKAGES_1.7.3.9000.tar.gz(r-4.4-noble)
PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.4-emscripten)PEcAn.LINKAGES_1.7.3.9000.tgz(r-4.3-emscripten)
PEcAn.LINKAGES.pdf |PEcAn.LINKAGES.html✨
PEcAn.LINKAGES/json (API)
NEWS

# Install 'PEcAn.LINKAGES' in R:

install.packages('PEcAn.LINKAGES', repos = c('https://pecanproject.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/pecanproject/pecan/issues

Uses libs:

jags– Just Another Gibbs Sampler for Bayesian MCMC
c++– GNU Standard C++ Library v3

On CRAN:

bayesian cyberinfrastructure data-assimilation data-science ecosystem-model ecosystem-science forecasting meta-analysis national-science-foundation pecan plants

8.31 score 202 stars 59 scripts 6 exports 210 dependencies

Last updated 2 days agofrom:caad7b3f83. Checks:OK: 1 NOTE: 3. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 04 2024
R-4.5-linux	NOTE	Nov 04 2024
R-4.4-mac	NOTE	Nov 04 2024
R-4.3-mac	NOTE	Nov 04 2024

Exports:met2model.LINKAGES model2netcdf.LINKAGES read_restart.LINKAGES split_inputs.LINKAGES write_restart.LINKAGES write.config.LINKAGES

Dependencies:abind admisc ape askpass assertthat backports base64enc bit bit64 blob boot bslib cachem CDM checkmate class classInt cli clipr clue cluster coda codetools colorspace conditionz cpp11 crayon crul curl data.table DBI dbplyr deldir digest downloader dplR dplyr duckdb duckdbfs e1071 evaluate fansi farver fastmap fastmatch fBasics fontawesome foreach foreign Formula fs furrr future generics getopt ggplot2 ggrepel globals glue gridExtra gss gtable HDInterval highr Hmisc hms hoardr htmlTable htmltools htmlwidgets httpcode httr igraph isoband iterators jquerylib jsonlite KernSmooth kknn knitr labeling lattice lazyeval lifecycle listenv lubridate magrittr MASS Matrix matrixStats memoise mgcv mime modeest munsell mvtnorm natserv ncdf4 neonstore neonUtilities nlme nnet openssl optparse parallelly pbapply pbv PEcAn.benchmark PEcAn.data.land PEcAn.DB PEcAn.logger PEcAn.remote PEcAn.settings PEcAn.utils PEcAn.visualization phangorn pillar pkgconfig plyr png polyclip polycor prettyunits progress proxy purrr quadprog R.methodsS3 R.oo R.utils R6 rappdirs ratelimitr RColorBrewer Rcpp RcppArmadillo readr rentrez reshape2 rex ritis rjags rlang rmarkdown rmutil rncl rotl rpart rredlist rstudioapi runjags rvest s2 sass scales selectr sf signal SimilarityMeasures sirt solrium sp spatial spatstat.data spatstat.geom spatstat.univar spatstat.utils stable stabledist statip storr stringi stringr swfscMisc sys TAM taxize terra thor tibble tidyr tidyselect timechange timeDate timeSeries tinytex traits triebeard tzdb units urltools utf8 uuid vctrs viridis viridisLite vroom WikidataQueryServiceR WikidataR WikipediR wikitaxa withr wk worrms xfun XML xml2 yaml zip zoo

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Write LINKAGES met files	met2model.LINKAGES
Convert LINKAGES's output into netCDF format	model2netcdf.LINKAGES
Read Restart for LINKAGES	read_restart.LINKAGES
split_inputs.LINKAGES	split_inputs.LINKAGES
write_restart.LINKAGES	write_restart.LINKAGES
Writes a LINKAGES config file.	write.config.LINKAGES