{
  "_id": "6a1ea0951d7bb097a0a70970",
  "Type": "Package",
  "Package": "SticsOnR",
  "Title": "Manage STICS Simulations Running the Executable or JavaStics,",
  "Version": "1.3.0",
  "Date": "2025-03-20",
  "Authors@R": "c(\nperson(\"Patrice\", \"Lecharpentier\", , \"patrice.lecharpentier@inrae.fr\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4044-4322\")),\nperson(\"Remi\", \"Vezy\", , \"remi.vezy@cirad.fr\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-0808-1461\")),\nperson(\"Samuel\", \"Buis\", , \"samuel.buis@inrae.fr\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-8676-5447\")),\nperson(\"Michel\", \"Giner\", , \"michel.giner@cirad.fr\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-9310-2377\")),\nperson(\"Julie\", \"Constantin\", role = \"rev\"),\nperson(\"Dominique\", \"Ripoche\", role = \"rev\"),\nperson(\"Marie\", \"Launay\", role = \"rev\"),\nperson(\"Christine\", \"Le Bas\", role = \"rev\"),\nperson(\"Alain\", \"Mollier\", role = \"rev\")\n)",
  "Description": "Running simulations with the 'STICS' crop model. Different\nways of performing simulations are available and based on three\nuse-cases: 1/ Calling 'JavaStics' command line to run\nsimulations on given situations. 'JavaStics' handles text files\ngeneration from 'XML' files; 2/ Calling the model 'fortran'\nexecutable directly. Text files must be produced beforehand;\nand 3/ Calling the model 'fortran' executable through a\nwrapper. It can handle distributed runs over the machine CPUs\nand returns simulated output data. The wrapper also provides a\nconcise manner for running simulations using custom parameter\nvalues and allows to chain simulations for successive\nsituations.",
  "License": "LGPL (>= 3)",
  "URL": "https://github.com/SticsRPacks/SticsOnR,\nhttps://doi.org/10.5281/zenodo.4443130",
  "BugReports": "https://github.com/SticsRPacks/SticsOnR/issues",
  "VignetteBuilder": "knitr",
  "ByteCompile": "true",
  "Encoding": "UTF-8",
  "Language": "en-US",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "Config/pak/sysreqs": "libicu-dev libxml2-dev libxslt-dev libssl-dev",
  "Repository": "https://pecanproject.r-universe.dev",
  "Date/Publication": "2026-04-03 12:23:06 UTC",
  "RemoteUrl": "https://github.com/SticsRPacks/SticsOnR",
  "RemoteRef": "HEAD",
  "RemoteSha": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-02 09:18:24 UTC",
    "User": "root"
  },
  "Author": "Patrice Lecharpentier [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-4044-4322>),\nRemi Vezy [aut] (ORCID: <https://orcid.org/0000-0002-0808-1461>),\nSamuel Buis [aut] (ORCID: <https://orcid.org/0000-0002-8676-5447>),\nMichel Giner [aut] (ORCID: <https://orcid.org/0000-0002-9310-2377>),\nJulie Constantin [rev],\nDominique Ripoche [rev],\nMarie Launay [rev],\nChristine Le Bas [rev],\nAlain Mollier [rev]",
  "Maintainer": "Patrice Lecharpentier <patrice.lecharpentier@inrae.fr>",
  "MD5sum": "37e1010f382fbbefe92b209a1d1158b4",
  "_user": "pecanproject",
  "_type": "src",
  "_file": "SticsOnR_1.3.0.tar.gz",
  "_fileid": "6a5a2bc1e3c22d0b278aacd2175f831f2de5e9bb14810ef60d7869e8adcc9801",
  "_filesize": 533058,
  "_sha256": "6a5a2bc1e3c22d0b278aacd2175f831f2de5e9bb14810ef60d7869e8adcc9801",
  "_created": "2026-06-02T09:18:24.000Z",
  "_published": "2026-06-02T09:21:25.185Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79038854330,
      "time": 140,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7353804185"
    },
    {
      "job": 79038854301,
      "time": 127,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7353799736"
    },
    {
      "job": 79038854226,
      "time": 78,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7353781343"
    },
    {
      "job": 79038854268,
      "time": 113,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7353794433"
    },
    {
      "job": 79038209995,
      "time": 227,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7353751000"
    },
    {
      "job": 79038854227,
      "time": 127,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7353799707"
    },
    {
      "job": 79038854239,
      "time": 90,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7353786863"
    },
    {
      "job": 79038854292,
      "time": 74,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7353779815"
    },
    {
      "job": 79038854302,
      "time": 70,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7353777987"
    }
  ],
  "_buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/SticsRPacks/SticsOnR",
  "_commit": {
    "id": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
    "author": "Rémi Vezy <VEZY@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #80 from SticsRPacks/fix-double-trigger-of-CI-on-PR\n\nFix running twice the CI on PR + remove devel",
    "time": 1775218986
  },
  "_maintainer": {
    "name": "Patrice Lecharpentier",
    "email": "patrice.lecharpentier@inrae.fr",
    "login": "plecharpent",
    "description": "",
    "uuid": 3098097,
    "orcid": "0000-0002-4044-4322"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.6.0",
      "role": "Depends"
    },
    {
      "package": "cli",
      "role": "Imports"
    },
    {
      "package": "crayon",
      "version": ">= 1.3.4",
      "role": "Imports"
    },
    {
      "package": "doParallel",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "foreach",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "rstudioapi",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "SticsRFiles",
      "version": ">= 1.1.3",
      "role": "Imports"
    },
    {
      "package": "semver",
      "role": "Imports"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "spelling",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "sticsrpacks",
  "_selfowned": false,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-49",
      "n": 1
    },
    {
      "week": "2025-50",
      "n": 3
    },
    {
      "week": "2025-51",
      "n": 2
    },
    {
      "week": "2026-07",
      "n": 1
    },
    {
      "week": "2026-14",
      "n": 5
    }
  ],
  "_tags": [],
  "_stars": 8,
  "_contributors": [
    {
      "user": "vezy",
      "count": 279,
      "uuid": 12777793
    },
    {
      "user": "plecharpent",
      "count": 244,
      "uuid": 3098097
    },
    {
      "user": "sbuis",
      "count": 90,
      "uuid": 6650744
    },
    {
      "user": "ginerm",
      "count": 25,
      "uuid": 47385647
    },
    {
      "user": "vrahier",
      "count": 16,
      "uuid": 32514202
    },
    {
      "user": "cyrillemidingoyi",
      "count": 5,
      "uuid": 34443570
    },
    {
      "user": "chabrier",
      "count": 1,
      "uuid": 2590591
    }
  ],
  "_userbio": {
    "uuid": 2879854,
    "type": "organization",
    "name": "PEcAn Project"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/SticsOnR"
  },
  "_devurl": "https://github.com/sticsrpacks/sticsonr",
  "_searchresults": 22,
  "_metadata": {
    "notes": "Suggested by PEcAn.STICS"
  },
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/SticsOnR.html",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "get_version_number",
    "run_javastics",
    "run_stics",
    "stics_wrapper",
    "stics_wrapper_options"
  ],
  "_help": [
    {
      "page": "get_version_number",
      "title": "Get STICS executable version number, or string, or hash",
      "topics": [
        "get_version_number"
      ]
    },
    {
      "page": "run_javastics",
      "title": "Running one or several usms from a javastics workspace",
      "topics": [
        "run_javastics"
      ]
    },
    {
      "page": "run_stics",
      "title": "Running usm(s) from a/several directory(ies) or a/several subdirectory(ies) named with usm name",
      "topics": [
        "run_stics"
      ]
    },
    {
      "page": "stics_wrapper",
      "title": "Running usm(s) from txt input files stored in one directory per 'situation', simulated results are returned in a list",
      "topics": [
        "stics_wrapper"
      ]
    },
    {
      "page": "stics_wrapper_options",
      "title": "Getting/setting a stics_wrapper options list with initialized fields",
      "topics": [
        "stics_wrapper_options"
      ]
    }
  ],
  "_pkglogo": "https://github.com/SticsRPacks/SticsOnR/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/SticsRPacks/SticsOnR/raw/HEAD/README.md",
  "_rundeps": [
    "assertthat",
    "cli",
    "codetools",
    "cpp11",
    "crayon",
    "curl",
    "data.table",
    "doParallel",
    "dplyr",
    "foreach",
    "generics",
    "glue",
    "iterators",
    "lifecycle",
    "lubridate",
    "magrittr",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "Rcpp",
    "rlang",
    "rstudioapi",
    "semver",
    "SticsRFiles",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "utf8",
    "vctrs",
    "withr",
    "XML",
    "xml2",
    "xslt"
  ],
  "_vignettes": [
    {
      "source": "Changing_java_version_linux.Rmd",
      "filename": "Changing_java_version_linux.html",
      "title": "Changing Java version procedure under linux",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Java installation",
        "Creating an alias to java 17",
        "Switching between version",
        "Using the system tools",
        "Using a shell script",
        "Switch back to the previous Java version on the system"
      ],
      "created": "2020-01-19 08:14:27",
      "modified": "2025-03-20 09:34:04",
      "commits": 8
    }
  ],
  "_score": 5.898725181589493,
  "_indexed": false,
  "_nocasepkg": "sticsonr",
  "_universes": [
    "pecanproject"
  ],
  "_indexurl": "https://sticsrpacks.r-universe.dev/SticsOnR",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3.0",
      "date": "2026-06-02T09:20:49.000Z",
      "distro": "noble",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "43707d5364302b1612cd4c7bb234cc580dd1e09cfa8339ca07a226385fd7185a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.3.0",
      "date": "2026-06-02T09:20:38.000Z",
      "distro": "noble",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "ddd01635055c204863487e91317cd635a64b7682d88282edfc32db80f8299ff0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.3.0",
      "date": "2026-06-02T09:19:53.000Z",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "4171963991745b55da3c4b1a3081c6cffb4bc8a09ec7ae0c86ce8d2a8fc88c44",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.3.0",
      "date": "2026-06-02T09:20:19.000Z",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "6fac6d7ce7b9bdb8808ad41f21c86f194a1dacd683e42fd0fddfbfab07b29b49",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.3.0",
      "date": "2026-06-02T09:20:51.000Z",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "730aa6f413837faccde2637d0a75d7d650048401a78f4fbcf255b0b00e909edd",
      "status": "success",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.3.0",
      "date": "2026-06-02T09:19:58.000Z",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "046b7e1e99449e535fc534daeb5ddd75e52390ef38221f623d8d52bee8111885",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.3.0",
      "date": "2026-06-02T09:19:40.000Z",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "926a3c4fb0e6b9c1830668f75f9c858f0ef390eb1d17e02993991b3afa0c0c2b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.3.0",
      "date": "2026-06-02T09:19:36.000Z",
      "commit": "bfc45b0c0823244422ed29b3da38f0dc9cf15d8f",
      "fileid": "9efe83f8d4f40e5b00d2e09ed53dd911e3fe766c28ba3cee2caf812be17f9d08",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/pecanproject/actions/runs/26810281818"
    }
  ]
}